Publications
Featured Selection
2019
Cofactors revisited - Predicting the impact of flavoprotein-related diseases on a genome scale.
Macrophage-Specific NF-κB Activation Dynamics Can Segregate Inflammatory Bowel Disease Patients.
Risk-Based Bioengineering Strategies for Reliable Bacterial Vaccine Production.
The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation.
2018
From correlation to causation: analysis of metabolomics data using systems biology approaches.
Modeling the Metabolic State of Mycobacterium tuberculosis Upon Infection.
Neochloris oleoabundans is worth its salt: Transcriptomic analysis under salt and nitrogen stress.
Regulation of Three Virulence Strategies of Mycobacterium tuberculosis: A Success Story.
SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles.
Studying microbial functionality within the gut ecosystem by systems biology.
2017
Aspergillus niger Secretes Citrate to Increase Iron Bioavailability.
Designing synthetic networks in silico: a generalised evolutionary algorithm approach.
Draft Genome Sequence of the Oleaginous Green Alga Tetradesmus obliquus UTEX 393.
Identification of methylated GnTI-dependent N-glycans in Botryococcus brauni.
Interactions Between phyB and PIF Proteins Alter Thermal Reversion Reactions in vitro.
2016
Efficient Reconstruction of Predictive Consensus Metabolic Network Models.
Harnessing the power of microbial autotrophy.
Identification of a Novel L-rhamnose Uptake Transporter in the Filamentous Fungus Aspergillus niger.
Integrated In Silico Analysis of Pathway Designs for Synthetic Photo-Electro-Autotrophy.
Strategies for structuring interdisciplinary education in Systems Biology: an European perspective.
Unearthing the transition rates between photoreceptor conformers.